Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa carboxylase subunit beta | PHEP_RS08065 | Not Available | Positive | 1911683 - 1913311 | 59139.3 |
| thioredoxin-disulfide reductase | PHEP_RS08070 | Not Available | Positive | 1913414 - 1914382 | 34964.5 |
| beta-n-acetylhexosaminidase | PHEP_RS08075 | Not Available | Positive | 1914500 - 1916404 | 70487.8 |
| hypothetical protein | PHEP_RS08080 | Not Available | Positive | 1916414 - 1917034 | 23199.0 |
| response regulator transcription factor | PHEP_RS08085 | Not Available | Negative | 1917054 - 1917686 | 23335.3 |
| ligand-binding sensor domain-containing protein | PHEP_RS08090 | Not Available | Negative | 1917643 - 1920597 | 110608.0 |
| voc family protein | PHEP_RS08095 | Not Available | Positive | 1920872 - 1921234 | 13972.8 |
| helix-turn-helix transcriptional regulator | PHEP_RS08100 | Not Available | Positive | 1921250 - 1922110 | 33481.2 |
| hypothetical protein | PHEP_RS08105 | Not Available | Negative | 1922285 - 1922884 | 23541.0 |
| rna polymerase sigma factor | PHEP_RS08110 | Not Available | Negative | 1922871 - 1923368 | 19585.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
