Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3857 domain-containing protein | PHEP_RS07965 | Not Available | Negative | 1882989 - 1884992 | 76494.1 |
| pqq-binding-like beta-propeller repeat protein | PHEP_RS07970 | Not Available | Negative | 1885051 - 1886886 | 67692.2 |
| imp dehydrogenase | PHEP_RS07975 | Not Available | Positive | 1887281 - 1888750 | 52210.3 |
| hypothetical protein | PHEP_RS07980 | Not Available | Negative | 1888769 - 1889482 | 27396.9 |
| sensor histidine kinase | PHEP_RS07985 | Not Available | Negative | 1889509 - 1891491 | 74555.1 |
| abc transporter permease | PHEP_RS07990 | Not Available | Negative | 1891565 - 1894150 | 95150.4 |
| abc transporter atp-binding protein | PHEP_RS07995 | Not Available | Negative | 1894143 - 1894829 | 24830.9 |
| arylesterase | PHEP_RS08000 | Not Available | Positive | 1894934 - 1895602 | 23801.9 |
| tetratricopeptide repeat protein | PHEP_RS21550 | Not Available | Positive | 1895622 - 1896710 | 41586.3 |
| aldo/keto reductase | PHEP_RS08010 | Not Available | Negative | 1896733 - 1897626 | 33464.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
