Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | PHEP_RS00760 | Not Available | Negative | 178728 - 179891 | 45012.4 |
| abc transporter atp-binding protein | PHEP_RS00765 | Not Available | Negative | 179893 - 181734 | 68545.7 |
| methylmalonyl co-a mutase-associated gtpase meab | PHEP_RS00770 | Not Available | Positive | 181866 - 182756 | 32163.1 |
| ompa family protein | PHEP_RS00775 | Not Available | Positive | 183117 - 184454 | 47641.6 |
| duf6728 family protein | PHEP_RS22125 | Not Available | Positive | 184534 - 184674 | 5412.94 |
| rida family protein | PHEP_RS00780 | Not Available | Positive | 184719 - 185099 | 13554.3 |
| eama family transporter | PHEP_RS00785 | Not Available | Positive | 185104 - 186015 | 34558.8 |
| atp-dependent dna helicase recg | PHEP_RS00790 | Not Available | Positive | 186020 - 188125 | 79692.7 |
| serine hydrolase domain-containing protein | PHEP_RS00795 | Not Available | Negative | 188126 - 189358 | 47060.6 |
| class ii fumarate hydratase | PHEP_RS00800 | Not Available | Positive | 189522 - 190919 | 49768.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
