Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | PHEP_RS07915 | Not Available | Positive | 1870462 - 1872315 | 70931.6 |
| m28 family metallopeptidase | PHEP_RS07920 | Not Available | Positive | 1872305 - 1873579 | 48637.3 |
| histidine kinase | PHEP_RS07925 | Not Available | Negative | 1873834 - 1874448 | 23606.1 |
| lytr/algr family response regulator transcription factor | PHEP_RS07930 | Not Available | Negative | 1874738 - 1875517 | 29396.2 |
| ferritin-like domain-containing protein | PHEP_RS07935 | Not Available | Positive | 1875678 - 1876400 | 25624.5 |
| ferritin-like domain-containing protein | PHEP_RS07940 | Not Available | Positive | 1876418 - 1877272 | 30347.6 |
| cyclic dehypoxanthinyl futalosine synthase | PHEP_RS07945 | Not Available | Negative | 1877335 - 1878459 | 42188.6 |
| m16 family metallopeptidase | PHEP_RS07950 | Not Available | Positive | 1878569 - 1879813 | 47012.0 |
| m16 family metallopeptidase | PHEP_RS07955 | Not Available | Positive | 1879806 - 1881080 | 47275.4 |
| duf3857 domain-containing protein | PHEP_RS07960 | Not Available | Negative | 1881091 - 1882989 | 71527.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
