Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS07865 | Not Available | Negative | 1855165 - 1856283 | 43422.2 |
| hypothetical protein | PHEP_RS07870 | Not Available | Negative | 1856353 - 1856538 | 7016.45 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS07875 | Not Available | Positive | 1856969 - 1860436 | 127002.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS07880 | Not Available | Positive | 1860622 - 1862061 | 52884.6 |
| phytanoyl-coa dioxygenase family protein | PHEP_RS07885 | Not Available | Positive | 1862205 - 1863026 | 30789.4 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS07890 | Not Available | Positive | 1863020 - 1863862 | 32856.0 |
| glycosyl hydrolase | PHEP_RS07895 | Not Available | Positive | 1863879 - 1866743 | 109899.0 |
| glycoside hydrolase family 28 protein | PHEP_RS07900 | Not Available | Positive | 1866803 - 1868233 | 53003.9 |
| glycosyl hydrolase family 28 protein | PHEP_RS07905 | Not Available | Positive | 1868236 - 1868976 | 26717.3 |
| glycoside hydrolase family 28 protein | PHEP_RS07910 | Not Available | Positive | 1868983 - 1870452 | 54613.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
