Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly scaffold iscu | PHEP_RS07815 | Not Available | Negative | 1847725 - 1848138 | 14894.7 |
| iscs subfamily cysteine desulfurase | PHEP_RS07820 | Not Available | Negative | 1848164 - 1849375 | 44349.2 |
| methylmalonyl-coa epimerase | PHEP_RS07825 | Not Available | Positive | 1849499 - 1849903 | 14686.9 |
| hypothetical protein | PHEP_RS07830 | Not Available | Positive | 1849907 - 1850194 | 11043.4 |
| type b 50s ribosomal protein l31 | PHEP_RS07835 | Not Available | Positive | 1850279 - 1850527 | 9720.64 |
| putative sugar nucleotidyl transferase | PHEP_RS07840 | Not Available | Positive | 1850599 - 1851774 | 43200.2 |
| triose-phosphate isomerase | PHEP_RS07845 | Not Available | Positive | 1851829 - 1852590 | 27475.9 |
| 50s ribosomal protein l11 methyltransferase | PHEP_RS07850 | Not Available | Positive | 1852591 - 1853427 | 31285.1 |
| udp-n-acetylmuramate--l-alanine ligase | PHEP_RS07855 | Not Available | Positive | 1853437 - 1854795 | 50679.3 |
| helix-turn-helix domain-containing protein | PHEP_RS07860 | Not Available | Positive | 1854833 - 1855162 | 12540.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
