Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | PHEP_RS07765 | Not Available | Negative | 1838109 - 1838558 | 17540.5 |
| nramp family divalent metal transporter | PHEP_RS07770 | Not Available | Negative | 1838582 - 1840465 | 69280.8 |
| metal-dependent transcriptional regulator | PHEP_RS07775 | Not Available | Negative | 1840467 - 1841120 | 24610.7 |
| lrp/asnc family transcriptional regulator | PHEP_RS07780 | Not Available | Positive | 1841258 - 1841728 | 17972.2 |
| uracil-dna glycosylase | PHEP_RS07785 | Not Available | Negative | 1841788 - 1842465 | 25089.1 |
| hypothetical protein | PHEP_RS07790 | Not Available | Positive | 1842614 - 1843153 | 20755.1 |
| hypothetical protein | PHEP_RS07795 | Not Available | Negative | 1843182 - 1843397 | 8397.85 |
| lysine--trna ligase | PHEP_RS07800 | Not Available | Negative | 1843484 - 1845205 | 65374.9 |
| amp-dependent synthetase/ligase | PHEP_RS07805 | Not Available | Negative | 1845336 - 1847249 | 71852.2 |
| hesb/isca family protein | PHEP_RS07810 | Not Available | Negative | 1847325 - 1847651 | 11895.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
