Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | PHEP_RS07720 | Not Available | Positive | 1828936 - 1829673 | 27982.1 |
| 50s ribosomal protein l34 | PHEP_RS21890 | Not Available | Positive | 1829766 - 1829924 | 6148.54 |
| ribonuclease p protein component | PHEP_RS07725 | Not Available | Positive | 1829988 - 1830407 | 16329.0 |
| membrane protein insertion efficiency factor yidd | PHEP_RS07730 | Not Available | Positive | 1830394 - 1830624 | 8565.76 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | PHEP_RS07735 | Not Available | Positive | 1830657 - 1831343 | 24734.8 |
| duf5723 family protein | PHEP_RS07740 | Not Available | Negative | 1831344 - 1832771 | 53863.9 |
| hypothetical protein | PHEP_RS07745 | Not Available | Negative | 1832791 - 1834365 | 60031.7 |
| duf423 domain-containing protein | PHEP_RS07750 | Not Available | Positive | 1834474 - 1834857 | 13991.4 |
| replication restart helicase pria | PHEP_RS07755 | Not Available | Positive | 1834860 - 1837334 | 94041.0 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | PHEP_RS07760 | Not Available | Positive | 1837435 - 1838091 | 24608.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
