Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nramp family divalent metal transporter | PHEP_RS07620 | Not Available | Positive | 1805032 - 1806162 | 40944.6 |
| sensor histidine kinase | PHEP_RS07625 | Not Available | Positive | 1806503 - 1807804 | 48423.8 |
| response regulator | PHEP_RS07630 | Not Available | Negative | 1807818 - 1808225 | 15615.1 |
| hybrid sensor histidine kinase/response regulator | PHEP_RS07635 | Not Available | Negative | 1808215 - 1809294 | 40851.9 |
| 7tm diverse intracellular signaling domain-containing protein | PHEP_RS07640 | Not Available | Negative | 1809308 - 1811500 | 82960.8 |
| hypothetical protein | PHEP_RS07645 | Not Available | Negative | 1811497 - 1812213 | 26175.5 |
| rv1355c family protein | PHEP_RS21885 | Not Available | Negative | 1812200 - 1814515 | 87337.3 |
| response regulator | PHEP_RS07655 | Not Available | Positive | 1814633 - 1815088 | 17673.4 |
| pkd domain-containing protein | PHEP_RS07660 | Not Available | Positive | 1815114 - 1818602 | 127053.0 |
| type ix secretion system membrane protein porp/sprf | PHEP_RS07665 | Not Available | Positive | 1818605 - 1819624 | 37709.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
