Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prephenate dehydratase | PHEP_RS07570 | Not Available | Negative | 1796037 - 1796870 | 31753.3 |
| 3-dehydroquinate synthase | PHEP_RS07575 | Not Available | Negative | 1797205 - 1798269 | 39893.7 |
| rna-binding s4 domain-containing protein | PHEP_RS07580 | Not Available | Negative | 1798269 - 1798475 | 7582.47 |
| proline dehydrogenase family protein | PHEP_RS07585 | Not Available | Positive | 1798572 - 1799759 | 45288.5 |
| catalase/peroxidase hpi | PHEP_RS07590 | Not Available | Negative | 1799839 - 1802112 | 83522.1 |
| had family hydrolase | PHEP_RS07595 | Not Available | Negative | 1802232 - 1802882 | 24884.7 |
| Trna-met | Not Available | Not Available | Positive | 1802935 - 1803008 | Not Available |
| class i sam-dependent methyltransferase | PHEP_RS07605 | Not Available | Positive | 1803327 - 1804151 | 31816.7 |
| hypothetical protein | PHEP_RS07610 | Not Available | Positive | 1804156 - 1804359 | 7834.4 |
| voc family protein | PHEP_RS07615 | Not Available | Negative | 1804503 - 1804862 | 13615.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
