Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | PHEP_RS07475 | Not Available | Positive | 1771469 - 1772014 | 21394.8 |
| hypothetical protein | PHEP_RS07480 | Not Available | Negative | 1772042 - 1773058 | 38821.9 |
| hypothetical protein | PHEP_RS07485 | Not Available | Positive | 1773195 - 1773503 | 11296.7 |
| aminoglycoside 6-adenylyltransferase | PHEP_RS07490 | Not Available | Positive | 1773624 - 1774517 | 34548.6 |
| metallophosphoesterase family protein | PHEP_RS07495 | Not Available | Negative | 1774539 - 1776050 | 56605.2 |
| duf5017 domain-containing protein | PHEP_RS07500 | Not Available | Negative | 1776047 - 1776985 | 34069.4 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS07505 | Not Available | Negative | 1777001 - 1778560 | 58549.6 |
| tonb-dependent receptor | PHEP_RS07510 | Not Available | Negative | 1778570 - 1782061 | 128077.0 |
| fecr family protein | PHEP_RS07515 | Not Available | Negative | 1782189 - 1783316 | 41666.6 |
| rna polymerase sigma factor | PHEP_RS07520 | Not Available | Negative | 1783401 - 1783982 | 22742.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
