Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | PHEP_RS00710 | Not Available | Positive | 166199 - 169231 | 109554.0 |
| glycosyltransferase family 1 protein | PHEP_RS00715 | Not Available | Positive | 169327 - 170484 | 43804.5 |
| gdsl-type esterase/lipase family protein | PHEP_RS00720 | Not Available | Positive | 170631 - 171548 | 34193.5 |
| acyltransferase family protein | PHEP_RS00725 | Not Available | Positive | 171637 - 172716 | 41995.6 |
| glycosyltransferase | PHEP_RS00730 | Not Available | Negative | 172729 - 173685 | 37167.6 |
| alpha-1,2-fucosyltransferase | PHEP_RS00735 | Not Available | Negative | 173693 - 174544 | 33450.8 |
| glycosyltransferase family 2 protein | PHEP_RS21395 | Not Available | Negative | 174593 - 175609 | 39319.6 |
| glycosyltransferase | PHEP_RS00745 | Not Available | Positive | 175658 - 176800 | 43081.7 |
| glycosyltransferase family 10 domain-containing protein | PHEP_RS00750 | Not Available | Negative | 176797 - 177759 | 37630.9 |
| glycosyl transferase | PHEP_RS00755 | Not Available | Negative | 177781 - 178731 | 37325.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
