Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | PHEP_RS07415 | Not Available | Positive | 1759593 - 1760627 | 38001.4 |
| tetratricopeptide repeat protein | PHEP_RS07420 | Not Available | Positive | 1760630 - 1761376 | 28699.6 |
| batd family protein | PHEP_RS07425 | Not Available | Positive | 1761396 - 1763234 | 67528.3 |
| sh3 domain-containing protein | PHEP_RS07430 | Not Available | Positive | 1763212 - 1764000 | 28912.2 |
| asma family protein | PHEP_RS21535 | Not Available | Positive | 1764040 - 1767123 | 114512.0 |
| ydei/ompd-associated family protein | PHEP_RS07445 | Not Available | Negative | 1767456 - 1767944 | 18286.6 |
| sterol desaturase family protein | PHEP_RS07450 | Not Available | Negative | 1768004 - 1768699 | 27576.4 |
| glxa family transcriptional regulator | PHEP_RS07455 | Not Available | Negative | 1768750 - 1769721 | 36817.4 |
| voc family protein | PHEP_RS07460 | Not Available | Positive | 1769817 - 1770170 | 13354.2 |
| tlpa family protein disulfide reductase | PHEP_RS21540 | Not Available | Negative | 1770196 - 1770939 | 28590.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
