Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | PHEP_RS07365 | Not Available | Positive | 1745705 - 1746142 | 16741.8 |
| helix-turn-helix transcriptional regulator | PHEP_RS07370 | Not Available | Negative | 1746145 - 1747053 | 34435.1 |
| atp-binding cassette domain-containing protein | PHEP_RS07375 | Not Available | Positive | 1747286 - 1749562 | 84086.1 |
| tolc family protein | PHEP_RS07380 | Not Available | Positive | 1749552 - 1750901 | 50435.6 |
| efflux rnd transporter periplasmic adaptor subunit | PHEP_RS07385 | Not Available | Positive | 1750922 - 1752022 | 39843.9 |
| efflux rnd transporter permease subunit | PHEP_RS07390 | Not Available | Positive | 1752033 - 1755407 | 124886.0 |
| aaa family atpase | PHEP_RS07395 | Not Available | Positive | 1755714 - 1756742 | 38482.0 |
| duf58 domain-containing protein | PHEP_RS07400 | Not Available | Positive | 1756746 - 1757621 | 33615.6 |
| hypothetical protein | PHEP_RS07405 | Not Available | Positive | 1757626 - 1758597 | 36685.6 |
| vwa domain-containing protein | PHEP_RS07410 | Not Available | Positive | 1758590 - 1759588 | 36498.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
