Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| srpbcc family protein | PHEP_RS07310 | Not Available | Negative | 1737185 - 1737583 | 14739.9 |
| orotate phosphoribosyltransferase | PHEP_RS07315 | Not Available | Negative | 1737583 - 1738248 | 24365.1 |
| sigma-70 family rna polymerase sigma factor | PHEP_RS07325 | Not Available | Positive | 1738673 - 1739533 | 32895.9 |
| nudix hydrolase | PHEP_RS07330 | Not Available | Positive | 1739679 - 1740302 | 23576.9 |
| pantetheine-phosphate adenylyltransferase | PHEP_RS07335 | Not Available | Negative | 1740297 - 1740758 | 17218.1 |
| rsmd family rna methyltransferase | PHEP_RS07340 | Not Available | Negative | 1740770 - 1741309 | 20325.6 |
| duf3822 family protein | PHEP_RS07345 | Not Available | Negative | 1741300 - 1742130 | 31601.3 |
| atp-dependent dna helicase | PHEP_RS07350 | Not Available | Positive | 1742183 - 1743625 | 54253.2 |
| mcp four helix bundle domain-containing protein | PHEP_RS07355 | Not Available | Positive | 1743643 - 1744332 | 25934.1 |
| sensor histidine kinase | PHEP_RS21530 | Not Available | Negative | 1744329 - 1745651 | 49814.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
