Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing enzyme family protein | PHEP_RS07210 | Not Available | Negative | 1713638 - 1714735 | 40530.1 |
| thioredoxin domain-containing protein | PHEP_RS07215 | Not Available | Positive | 1714787 - 1716799 | 76299.8 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PHEP_RS07220 | Not Available | Positive | 1716812 - 1717312 | 17956.9 |
| hypothetical protein | PHEP_RS07225 | Not Available | Negative | 1717406 - 1717849 | 16414.5 |
| abc transporter permease | PHEP_RS07230 | Not Available | Negative | 1717876 - 1719072 | 43453.9 |
| abc transporter atp-binding protein | PHEP_RS07235 | Not Available | Negative | 1719069 - 1719698 | 22911.6 |
| abc-f family atp-binding cassette domain-containing protein | PHEP_RS07240 | Not Available | Negative | 1719826 - 1721451 | 61346.1 |
| hypothetical protein | PHEP_RS07245 | Not Available | Positive | 1721523 - 1722089 | 22197.5 |
| nitroreductase | PHEP_RS07250 | Not Available | Positive | 1722149 - 1722727 | 21975.6 |
| hypothetical protein | PHEP_RS07255 | Not Available | Positive | 1722729 - 1723175 | 16140.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
