Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-processing protein dpra | PHEP_RS07160 | Not Available | Positive | 1701933 - 1703024 | 40380.0 |
| pyridoxal-phosphate dependent enzyme | PHEP_RS07165 | Not Available | Positive | 1703177 - 1704538 | 50025.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | PHEP_RS07170 | Not Available | Negative | 1704630 - 1705955 | 48260.2 |
| duf4290 domain-containing protein | PHEP_RS07175 | Not Available | Negative | 1705989 - 1706657 | 25713.7 |
| ferritin-like domain-containing protein | PHEP_RS07180 | Not Available | Negative | 1706834 - 1709149 | 87833.6 |
| dipeptidase | PHEP_RS07185 | Not Available | Positive | 1709261 - 1710631 | 50467.1 |
| glycoside hydrolase family 25 protein | PHEP_RS07190 | Not Available | Positive | 1710691 - 1711713 | 39752.0 |
| Trna-leu | Not Available | Not Available | Positive | 1711803 - 1711886 | Not Available |
| hypothetical protein | PHEP_RS07200 | Not Available | Positive | 1711964 - 1712146 | 6766.07 |
| cardiolipin synthase | PHEP_RS07205 | Not Available | Negative | 1712184 - 1713641 | 55415.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
