Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS07110 | Not Available | Positive | 1690958 - 1691188 | 8841.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | PHEP_RS07115 | Not Available | Positive | 1691251 - 1692054 | 29511.7 |
| trans-sulfuration enzyme family protein | PHEP_RS07120 | Not Available | Positive | 1692101 - 1693267 | 42914.4 |
| duf1049 domain-containing protein | PHEP_RS07125 | Not Available | Negative | 1693340 - 1693612 | 10388.7 |
| hypothetical protein | PHEP_RS07130 | Not Available | Negative | 1693616 - 1696426 | 107131.0 |
| dmt family transporter | PHEP_RS07135 | Not Available | Negative | 1696768 - 1697658 | 33033.6 |
| lptf/lptg family permease | PHEP_RS07140 | Not Available | Negative | 1697658 - 1698761 | 42009.4 |
| trna guanosine(34) transglycosylase tgt | PHEP_RS07145 | Not Available | Negative | 1698762 - 1699892 | 42377.3 |
| glycosyltransferase | PHEP_RS07150 | Not Available | Positive | 1700080 - 1701210 | 43231.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | PHEP_RS07155 | Not Available | Positive | 1701207 - 1701833 | 23723.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
