Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase family protein | PHEP_RS07060 | Not Available | Positive | 1679582 - 1680727 | 42344.6 |
| acetyl-coa carboxylase, carboxyltransferase subunit beta | PHEP_RS07065 | Not Available | Negative | 1680745 - 1681590 | 31166.0 |
| class ii fructose-bisphosphate aldolase | PHEP_RS07070 | Not Available | Positive | 1681719 - 1682798 | 39617.9 |
| low affinity iron permease family protein | PHEP_RS07075 | Not Available | Positive | 1682946 - 1683452 | 18846.7 |
| gnat family n-acetyltransferase | PHEP_RS07080 | Not Available | Positive | 1683418 - 1683843 | 16397.7 |
| hydroxymethylglutaryl-coa lyase | PHEP_RS07085 | Not Available | Negative | 1683840 - 1684700 | 31792.1 |
| nad(p)/fad-dependent oxidoreductase | PHEP_RS07090 | Not Available | Negative | 1684681 - 1686006 | 48744.1 |
| protein translocase subunit secdf | PHEP_RS07095 | Not Available | Negative | 1686109 - 1689081 | 107708.0 |
| dihydrofolate reductase | PHEP_RS07100 | Not Available | Negative | 1689195 - 1689680 | 18165.7 |
| thymidylate synthase | PHEP_RS07105 | Not Available | Negative | 1689677 - 1690471 | 30157.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
