Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | PHEP_RS07015 | Not Available | Positive | 1672486 - 1672815 | 11975.1 |
| ybbr-like domain-containing protein | PHEP_RS07020 | Not Available | Positive | 1672886 - 1673833 | 36419.7 |
| dephospho-coa kinase | PHEP_RS07025 | Not Available | Positive | 1673833 - 1674429 | 21999.9 |
| rna procession exonuclease-like protein | PHEP_RS07030 | Not Available | Positive | 1674426 - 1675367 | 35817.6 |
| duf5522 domain-containing protein | PHEP_RS22170 | Not Available | Positive | 1675367 - 1675528 | 6221.59 |
| marr family winged helix-turn-helix transcriptional regulator | PHEP_RS07035 | Not Available | Positive | 1675539 - 1675988 | 17058.9 |
| zip family metal transporter | PHEP_RS07040 | Not Available | Negative | 1675985 - 1676719 | 26865.4 |
| phosphatase pap2 family protein | PHEP_RS07045 | Not Available | Negative | 1676719 - 1677282 | 21440.7 |
| class i sam-dependent methyltransferase | PHEP_RS07050 | Not Available | Negative | 1677279 - 1678010 | 28588.2 |
| phosphoglucosamine mutase | PHEP_RS07055 | Not Available | Positive | 1678167 - 1679555 | 49935.2 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
