Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | PHEP_RS06965 | Not Available | Positive | 1660426 - 1661754 | 48522.9 |
| cytochrome d ubiquinol oxidase subunit ii | PHEP_RS06970 | Not Available | Positive | 1661759 - 1662778 | 37558.0 |
| had family hydrolase | PHEP_RS06975 | Not Available | Positive | 1662799 - 1663404 | 21903.4 |
| hypothetical protein | PHEP_RS06980 | Not Available | Positive | 1663603 - 1664478 | 31306.8 |
| outer membrane beta-barrel protein | PHEP_RS06985 | Not Available | Positive | 1664570 - 1667557 | 110370.0 |
| duf3276 family protein | PHEP_RS06990 | Not Available | Negative | 1667626 - 1667952 | 12987.1 |
| abc transporter atp-binding protein | PHEP_RS06995 | Not Available | Negative | 1668022 - 1669812 | 68076.2 |
| glu/leu/phe/val family dehydrogenase | PHEP_RS07000 | Not Available | Positive | 1669926 - 1671014 | 38917.0 |
| transcription antitermination factor nusb | PHEP_RS07005 | Not Available | Positive | 1671105 - 1671998 | 34281.4 |
| duf1573 domain-containing protein | PHEP_RS07010 | Not Available | Positive | 1672002 - 1672463 | 16022.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
