Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | PHEP_RS06820 | Not Available | Negative | 1623990 - 1625111 | 41000.4 |
| rna polymerase sigma factor | PHEP_RS06825 | Not Available | Negative | 1625186 - 1625758 | 22486.6 |
| hypothetical protein | PHEP_RS06830 | Not Available | Positive | 1625981 - 1626226 | 9049.41 |
| acyl-coa thioesterase | PHEP_RS06835 | Not Available | Negative | 1626440 - 1626832 | 15105.4 |
| hypothetical protein | PHEP_RS06840 | Not Available | Negative | 1626875 - 1627429 | 20242.2 |
| hypothetical protein | PHEP_RS06845 | Not Available | Positive | 1627646 - 1627837 | 7465.7 |
| hypothetical protein | PHEP_RS06850 | Not Available | Positive | 1628055 - 1628483 | 16454.7 |
| dna polymerase iv | PHEP_RS06855 | Not Available | Positive | 1628575 - 1629732 | 43620.1 |
| dna polymerase iii subunit alpha | PHEP_RS06860 | Not Available | Positive | 1629736 - 1632675 | 112119.0 |
| lrp/asnc family transcriptional regulator | PHEP_RS06865 | Not Available | Negative | 1632672 - 1633139 | 17578.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
