Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferritin-like domain-containing protein | PHEP_RS21875 | Not Available | Positive | 1610179 - 1610412 | 8658.45 |
| tlpa disulfide reductase family protein | PHEP_RS06770 | Not Available | Negative | 1610604 - 1611722 | 42311.1 |
| hypothetical protein | PHEP_RS06775 | Not Available | Negative | 1611819 - 1612400 | 22567.5 |
| exonuclease domain-containing protein | PHEP_RS06780 | Not Available | Negative | 1612668 - 1612928 | 9959.85 |
| alkaline phosphatase pafa | PHEP_RS06785 | Not Available | Negative | 1613192 - 1614850 | 61527.6 |
| phosphodiester glycosidase family protein | PHEP_RS22280 | Not Available | Negative | 1614874 - 1616814 | 67691.0 |
| ipt/tig domain-containing protein | PHEP_RS06800 | Not Available | Negative | 1616826 - 1618145 | 45200.7 |
| phosphodiester glycosidase family protein | PHEP_RS06805 | Not Available | Negative | 1618165 - 1619103 | 34421.3 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS06810 | Not Available | Negative | 1619137 - 1620417 | 47157.4 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS06815 | Not Available | Negative | 1620435 - 1623722 | 119928.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
