Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | PHEP_RS06715 | Not Available | Negative | 1600803 - 1602092 | 49344.9 |
| hamp domain-containing sensor histidine kinase | PHEP_RS06720 | Not Available | Negative | 1602161 - 1603519 | 51698.6 |
| response regulator transcription factor | PHEP_RS06725 | Not Available | Negative | 1603525 - 1604208 | 25945.6 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS06730 | Not Available | Negative | 1604243 - 1605148 | 32762.7 |
| hypothetical protein | PHEP_RS06735 | Not Available | Negative | 1605272 - 1605613 | 11835.8 |
| ktsc domain-containing protein | PHEP_RS06740 | Not Available | Positive | 1605718 - 1606164 | 16963.4 |
| glycoside hydrolase family 10 protein | PHEP_RS06745 | Not Available | Positive | 1606248 - 1607774 | 57498.6 |
| ycii family protein | PHEP_RS06750 | Not Available | Negative | 1608097 - 1608456 | 13270.0 |
| crp/fnr family transcriptional regulator | PHEP_RS06755 | Not Available | Negative | 1608529 - 1609095 | 22017.8 |
| hypothetical protein | PHEP_RS06760 | Not Available | Negative | 1609202 - 1609744 | 20070.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
