Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS06615 | Not Available | Negative | 1577381 - 1577629 | 9313.1 |
| hypothetical protein | PHEP_RS06620 | Not Available | Positive | 1577770 - 1578225 | 18286.7 |
| tlpa family protein disulfide reductase | PHEP_RS06625 | Not Available | Positive | 1578267 - 1578836 | 21978.1 |
| sigma-70 family rna polymerase sigma factor | PHEP_RS06630 | Not Available | Positive | 1578845 - 1579687 | 31589.6 |
| carboxymuconolactone decarboxylase family protein | PHEP_RS06635 | Not Available | Positive | 1579750 - 1580202 | 17092.5 |
| tonb-dependent receptor | PHEP_RS06640 | Not Available | Negative | 1580222 - 1582618 | 90121.2 |
| httm domain-containing protein | PHEP_RS06645 | Not Available | Negative | 1582615 - 1583973 | 53227.0 |
| imelysin family protein | PHEP_RS06650 | Not Available | Negative | 1583960 - 1585036 | 39358.0 |
| duf4856 domain-containing protein | PHEP_RS06655 | Not Available | Negative | 1585154 - 1586248 | 38828.1 |
| response regulator transcription factor | PHEP_RS06660 | Not Available | Positive | 1586393 - 1587067 | 25823.1 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
