Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS06565 | Not Available | Negative | 1561232 - 1562587 | 49695.6 |
| mannonate dehydratase | PHEP_RS06570 | Not Available | Positive | 1562771 - 1563967 | 44735.5 |
| sialate o-acetylesterase | PHEP_RS06575 | Not Available | Positive | 1563986 - 1565395 | 51796.0 |
| glycosyl hydrolase 115 family protein | PHEP_RS06580 | Not Available | Positive | 1565402 - 1567540 | 80471.9 |
| hybrid sensor histidine kinase/response regulator transcription factor | PHEP_RS06585 | Not Available | Negative | 1567541 - 1571653 | 155066.0 |
| magnesium transporter | PHEP_RS06590 | Not Available | Positive | 1571850 - 1573226 | 51458.7 |
| s8 family peptidase | PHEP_RS06595 | Not Available | Positive | 1573635 - 1574966 | 48530.7 |
| redox-regulated atpase ychf | PHEP_RS06600 | Not Available | Negative | 1574963 - 1576057 | 39892.8 |
| hypothetical protein | PHEP_RS06605 | Not Available | Positive | 1576158 - 1576637 | 17591.8 |
| srpbcc family protein | PHEP_RS06610 | Not Available | Negative | 1576634 - 1577347 | 27059.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
