Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS06515 | Not Available | Positive | 1551848 - 1553335 | 53869.3 |
| helix-turn-helix transcriptional regulator | PHEP_RS06520 | Not Available | Positive | 1553671 - 1554438 | 28944.6 |
| hypothetical protein | PHEP_RS06525 | Not Available | Positive | 1554503 - 1554946 | 16408.1 |
| dinb family protein | PHEP_RS06530 | Not Available | Negative | 1555008 - 1555508 | 19215.0 |
| mmcq/yjbr family dna-binding protein | PHEP_RS06535 | Not Available | Negative | 1555607 - 1555942 | 12810.6 |
| ferritin-like domain-containing protein | PHEP_RS06540 | Not Available | Negative | 1556033 - 1556608 | 20842.7 |
| hypothetical protein | PHEP_RS06545 | Not Available | Positive | 1556774 - 1557067 | 11147.2 |
| glycosyl hydrolase 115 family protein | PHEP_RS06550 | Not Available | Negative | 1557094 - 1559301 | 84135.2 |
| grp family sugar transporter | PHEP_RS06555 | Not Available | Negative | 1559314 - 1560312 | 36038.9 |
| ribokinase | PHEP_RS06560 | Not Available | Negative | 1560320 - 1561219 | 31300.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
