Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| discoidin domain-containing protein | PHEP_RS06465 | Not Available | Positive | 1530705 - 1533734 | 112532.0 |
| glycoside hydrolase family 2 tim barrel-domain containing protein | PHEP_RS06470 | Not Available | Positive | 1533767 - 1536706 | 108979.0 |
| duf2264 domain-containing protein | PHEP_RS06475 | Not Available | Positive | 1536719 - 1537954 | 46484.0 |
| glycoside hydrolase family 88 protein | PHEP_RS06480 | Not Available | Positive | 1537968 - 1539170 | 44671.7 |
| gh39 family glycosyl hydrolase | PHEP_RS06485 | Not Available | Positive | 1539167 - 1540738 | 60068.4 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS06490 | Not Available | Positive | 1540962 - 1543736 | 102355.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS06495 | Not Available | Positive | 1543748 - 1545445 | 63557.0 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS06500 | Not Available | Positive | 1545488 - 1548577 | 113899.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS06505 | Not Available | Positive | 1548589 - 1550304 | 63114.2 |
| hypothetical protein | PHEP_RS06510 | Not Available | Positive | 1550330 - 1551835 | 52145.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
