Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | PHEP_RS00605 | Not Available | Negative | 145170 - 145700 | 20293.3 |
| nicotinamide riboside transporter pnuc | PHEP_RS00610 | Not Available | Negative | 145684 - 146298 | 23887.3 |
| carboxypeptidase regulatory-like domain-containing protein | PHEP_RS00615 | Not Available | Positive | 146416 - 146727 | 10964.5 |
| carbamoyl-phosphate synthase large subunit | PHEP_RS00625 | Not Available | Positive | 146943 - 149759 | 104430.0 |
| dna repair protein rada | PHEP_RS00630 | Not Available | Negative | 150070 - 151446 | 50374.8 |
| rne/rng family ribonuclease | PHEP_RS00635 | Not Available | Negative | 151649 - 153199 | 58618.2 |
| tetratricopeptide repeat protein | PHEP_RS00640 | Not Available | Negative | 153452 - 154321 | 31163.9 |
| hu family dna-binding protein | PHEP_RS00645 | Not Available | Negative | 154327 - 154629 | 11103.6 |
| a/g-specific adenine glycosylase | PHEP_RS00650 | Not Available | Positive | 154802 - 155851 | 40095.1 |
| single-stranded dna-binding protein | PHEP_RS00655 | Not Available | Positive | 155866 - 156294 | 15947.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
