Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase domain-containing protein | PHEP_RS06365 | Not Available | Negative | 1505776 - 1506540 | 28439.3 |
| pas domain-containing protein | PHEP_RS06370 | Not Available | Negative | 1506621 - 1507910 | 49618.5 |
| duf2911 domain-containing protein | PHEP_RS06375 | Not Available | Positive | 1508055 - 1508570 | 18765.8 |
| Trna-arg | Not Available | Not Available | Positive | 1508616 - 1508687 | Not Available |
| dinb family protein | PHEP_RS06385 | Not Available | Negative | 1508758 - 1509258 | 19434.4 |
| fad-dependent oxidoreductase | PHEP_RS06390 | Not Available | Negative | 1509373 - 1510518 | 42856.1 |
| helix-turn-helix domain-containing protein | PHEP_RS06395 | Not Available | Negative | 1510548 - 1511306 | 29197.2 |
| rna polymerase sigma factor | PHEP_RS06400 | Not Available | Positive | 1511696 - 1512280 | 22813.9 |
| fecr family protein | PHEP_RS06405 | Not Available | Positive | 1512413 - 1513384 | 37172.6 |
| tonb-dependent receptor | PHEP_RS06410 | Not Available | Positive | 1513565 - 1516990 | 125035.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
