Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5103 domain-containing protein | PHEP_RS06315 | Not Available | Negative | 1494562 - 1495830 | 48841.7 |
| abc-f family atp-binding cassette domain-containing protein | PHEP_RS06320 | Not Available | Negative | 1495827 - 1497743 | 72320.0 |
| quinone-dependent dihydroorotate dehydrogenase | PHEP_RS06325 | Not Available | Positive | 1497834 - 1498868 | 38377.5 |
| hypothetical protein | PHEP_RS06330 | Not Available | Negative | 1498941 - 1499117 | 6530.07 |
| Trna-cys | Not Available | Not Available | Positive | 1499146 - 1499219 | Not Available |
| trmh family rna methyltransferase | PHEP_RS06340 | Not Available | Negative | 1499268 - 1500017 | 27397.5 |
| bama/tama family outer membrane protein | PHEP_RS06345 | Not Available | Positive | 1500008 - 1502386 | 90406.8 |
| hypothetical protein | PHEP_RS06350 | Not Available | Negative | 1502383 - 1502913 | 19928.6 |
| patatin-like phospholipase family protein | PHEP_RS06355 | Not Available | Negative | 1502910 - 1505237 | 88343.1 |
| tspo/mbr family protein | PHEP_RS06360 | Not Available | Negative | 1505259 - 1505732 | 17936.7 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
