Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS06115 | Not Available | Negative | 1441921 - 1442133 | 7998.42 |
| exo-beta-n-acetylmuramidase namz domain-containing protein | PHEP_RS06120 | Not Available | Negative | 1442162 - 1443388 | 45436.2 |
| abc transporter permease | PHEP_RS06125 | Not Available | Positive | 1443469 - 1444689 | 46175.6 |
| atp-binding protein | PHEP_RS06130 | Not Available | Negative | 1444890 - 1447253 | 88731.0 |
| voc family protein | PHEP_RS06135 | Not Available | Negative | 1447447 - 1447875 | 15862.9 |
| glxa family transcriptional regulator | PHEP_RS06140 | Not Available | Positive | 1447993 - 1448976 | 36879.5 |
| dead/deah box helicase | PHEP_RS06145 | Not Available | Positive | 1449041 - 1450330 | 47414.7 |
| nucleoside triphosphate pyrophosphohydrolase | PHEP_RS06150 | Not Available | Negative | 1450695 - 1451501 | 30724.6 |
| hypothetical protein | PHEP_RS06155 | Not Available | Negative | 1451512 - 1451808 | 10896.7 |
| ai-2e family transporter | PHEP_RS06160 | Not Available | Negative | 1451812 - 1452924 | 41631.8 |
Pathways
302 pathways
Health Effects
No health effects information available for this bacterium.
