Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase component i family protein | PHEP_RS06015 | Not Available | Negative | 1421756 - 1423009 | 47074.5 |
| adenylosuccinate synthase | PHEP_RS06020 | Not Available | Negative | 1423079 - 1424356 | 46854.5 |
| fur family transcriptional regulator | PHEP_RS06025 | Not Available | Negative | 1424391 - 1424885 | 19037.8 |
| rela/spot family protein | PHEP_RS06030 | Not Available | Negative | 1424949 - 1427156 | 83712.3 |
| duf4294 domain-containing protein | PHEP_RS06035 | Not Available | Positive | 1427395 - 1428012 | 23564.8 |
| glutathione peroxidase | PHEP_RS06040 | Not Available | Positive | 1428018 - 1428494 | 18095.9 |
| bacillithiol biosynthesis deacetylase bshb1 | PHEP_RS06045 | Not Available | Positive | 1428510 - 1429226 | 26529.7 |
| acyl-coa dehydrogenase family protein | PHEP_RS06050 | Not Available | Positive | 1429294 - 1430655 | 50419.3 |
| hypothetical protein | PHEP_RS06055 | Not Available | Negative | 1430659 - 1431063 | 14799.8 |
| l-lysine 6-transaminase | PHEP_RS06060 | Not Available | Negative | 1431063 - 1432394 | 49857.9 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
