Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s9 | PHEP_RS00555 | Not Available | Positive | 133993 - 134379 | 14277.5 |
| 30s ribosomal protein s2 | PHEP_RS00560 | Not Available | Positive | 134398 - 135222 | 30479.9 |
| translation elongation factor ts | PHEP_RS00565 | Not Available | Positive | 135322 - 136161 | 29941.7 |
| n-acetylglucosamine-6-phosphate deacetylase | PHEP_RS00570 | Not Available | Positive | 136250 - 137350 | 39525.5 |
| ump kinase | PHEP_RS00575 | Not Available | Positive | 137395 - 138102 | 25840.5 |
| ribosome recycling factor | PHEP_RS00580 | Not Available | Positive | 138143 - 138706 | 20913.4 |
| abc transporter atp-binding protein | PHEP_RS00585 | Not Available | Positive | 138809 - 140557 | 65121.5 |
| mfs transporter | PHEP_RS00590 | Not Available | Negative | 140581 - 141858 | 46639.5 |
| thiamine phosphate synthase | PHEP_RS00595 | Not Available | Negative | 141893 - 142525 | 22993.7 |
| tonb-dependent receptor | PHEP_RS00600 | Not Available | Negative | 142533 - 145007 | 92176.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
