Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS05915 | Not Available | Positive | 1400245 - 1400997 | 27896.5 |
| glxa family transcriptional regulator | PHEP_RS05920 | Not Available | Negative | 1401023 - 1401997 | 36310.4 |
| hypothetical protein | PHEP_RS05925 | Not Available | Negative | 1402159 - 1402350 | 6531.03 |
| sensor histidine kinase | PHEP_RS05930 | Not Available | Negative | 1402435 - 1403745 | 49943.1 |
| response regulator transcription factor | PHEP_RS05935 | Not Available | Negative | 1403769 - 1404446 | 25971.3 |
| efflux transporter outer membrane subunit | PHEP_RS05940 | Not Available | Negative | 1404522 - 1405928 | 51524.1 |
| efflux rnd transporter permease subunit | PHEP_RS05945 | Not Available | Negative | 1405939 - 1409115 | 114702.0 |
| efflux rnd transporter periplasmic adaptor subunit | PHEP_RS05950 | Not Available | Negative | 1409158 - 1410327 | 42082.3 |
| tetr/acrr family transcriptional regulator | PHEP_RS05955 | Not Available | Negative | 1410354 - 1410941 | 22981.0 |
| (d)cmp kinase | PHEP_RS05960 | Not Available | Negative | 1411094 - 1411771 | 25768.6 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
