Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PHEP_RS05865 | Not Available | Negative | 1385011 - 1386714 | 62958.8 |
| tetratricopeptide repeat protein | PHEP_RS05870 | Not Available | Negative | 1386726 - 1389743 | 115555.0 |
| aspartate carbamoyltransferase catalytic subunit | PHEP_RS05875 | Not Available | Negative | 1389914 - 1390846 | 34417.1 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | PHEP_RS05880 | Not Available | Negative | 1390848 - 1391396 | 20880.3 |
| beta-n-acetylhexosaminidase | PHEP_RS05885 | Not Available | Negative | 1391520 - 1393121 | 61334.4 |
| 30s ribosomal protein s1 | PHEP_RS05890 | Not Available | Negative | 1393245 - 1395179 | 71617.0 |
| hypothetical protein | PHEP_RS05895 | Not Available | Positive | 1395505 - 1396206 | 26595.3 |
| lrp/asnc family transcriptional regulator | PHEP_RS05900 | Not Available | Positive | 1396224 - 1396727 | 19292.4 |
| phosphocholine-specific phospholipase c | PHEP_RS05905 | Not Available | Positive | 1396780 - 1399218 | 92410.9 |
| voc family protein | PHEP_RS05910 | Not Available | Negative | 1399221 - 1400063 | 31397.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
