Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 1370585 - 1373463 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 1373603 - 1373714 | Not Available |
| acyl-acp desaturase | PHEP_RS05825 | Not Available | Positive | 1373990 - 1374970 | 38031.6 |
| methylmalonyl-coa mutase family protein | PHEP_RS05830 | Not Available | Negative | 1374974 - 1378369 | 126426.0 |
| alkaline phosphatase pafa | PHEP_RS05835 | Not Available | Negative | 1378520 - 1380187 | 62162.8 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | PHEP_RS05840 | Not Available | Negative | 1380374 - 1381660 | 47437.5 |
| hypothetical protein | PHEP_RS05845 | Not Available | Negative | 1381702 - 1382523 | 28592.6 |
| exbd/tolr family protein | PHEP_RS05850 | Not Available | Negative | 1382520 - 1382921 | 14865.4 |
| mota/tolq/exbb proton channel family protein | PHEP_RS05855 | Not Available | Negative | 1382921 - 1383631 | 25890.5 |
| spor domain-containing protein | PHEP_RS05860 | Not Available | Negative | 1383634 - 1384956 | 49085.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
