Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS05710 | Not Available | Negative | 1343023 - 1343748 | 26723.1 |
| srpbcc family protein | PHEP_RS05715 | Not Available | Positive | 1344075 - 1344518 | 16454.5 |
| laci family dna-binding transcriptional regulator | PHEP_RS05720 | Not Available | Negative | 1344603 - 1345613 | 37462.1 |
| pectinesterase family protein | PHEP_RS05725 | Not Available | Positive | 1345841 - 1346878 | 38032.2 |
| glycoside hydrolase 43 family protein | PHEP_RS05730 | Not Available | Positive | 1346892 - 1348574 | 62270.0 |
| laci family dna-binding transcriptional regulator | PHEP_RS05735 | Not Available | Negative | 1348557 - 1349591 | 38288.1 |
| sodium/sugar symporter | PHEP_RS05740 | Not Available | Positive | 1349725 - 1351413 | 61751.1 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS05745 | Not Available | Positive | 1351677 - 1354868 | 117522.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS05750 | Not Available | Positive | 1354890 - 1356668 | 65924.4 |
| duf4957 domain-containing protein | PHEP_RS05755 | Not Available | Positive | 1356680 - 1358224 | 54055.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
