Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase family protein | PHEP_RS05660 | Not Available | Positive | 1332276 - 1333214 | 35242.5 |
| pa0069 family radical sam protein | PHEP_RS05665 | Not Available | Negative | 1333229 - 1334302 | 40426.9 |
| enoyl-acp reductase fabi | PHEP_RS05670 | Not Available | Negative | 1334393 - 1335211 | 29665.6 |
| dna repair protein recn | PHEP_RS05675 | Not Available | Negative | 1335268 - 1336929 | 62153.3 |
| m56 family metallopeptidase | PHEP_RS05680 | Not Available | Negative | 1337021 - 1338817 | 68837.4 |
| blai/meci/copy family transcriptional regulator | PHEP_RS05685 | Not Available | Negative | 1338819 - 1339202 | 14325.2 |
| duf4835 family protein | PHEP_RS05690 | Not Available | Negative | 1339293 - 1340204 | 34415.0 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | PHEP_RS05695 | Not Available | Negative | 1340201 - 1341400 | 43190.7 |
| dna-directed rna polymerase subunit omega | PHEP_RS05700 | Not Available | Negative | 1341446 - 1341772 | 12576.8 |
| outer membrane protein assembly factor bamd | PHEP_RS05705 | Not Available | Negative | 1341772 - 1342701 | 35739.4 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
