Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS05515 | Not Available | Positive | 1293192 - 1293716 | 20189.9 |
| hypothetical protein | PHEP_RS05520 | Not Available | Positive | 1293723 - 1294688 | 35580.5 |
| hypothetical protein | PHEP_RS05525 | Not Available | Positive | 1294692 - 1295201 | 18592.1 |
| toxin-antitoxin system ywqk family antitoxin | PHEP_RS21525 | Not Available | Positive | 1295198 - 1295728 | 20067.7 |
| hypothetical protein | PHEP_RS05535 | Not Available | Positive | 1295725 - 1296984 | 46461.5 |
| hypothetical protein | PHEP_RS05540 | Not Available | Positive | 1296978 - 1297334 | 13073.0 |
| pulj/gspj family protein | PHEP_RS05545 | Not Available | Positive | 1297324 - 1297800 | 17718.9 |
| type ii secretion system f family protein | PHEP_RS05550 | Not Available | Positive | 1297804 - 1298961 | 43805.4 |
| hypothetical protein | PHEP_RS05555 | Not Available | Positive | 1298979 - 1299209 | 8921.87 |
| alpha/beta hydrolase | PHEP_RS05560 | Not Available | Negative | 1299206 - 1300123 | 33340.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
