Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS05465 | Not Available | Positive | 1278284 - 1278916 | 24408.3 |
| duf6266 family protein | PHEP_RS05470 | Not Available | Positive | 1278927 - 1279508 | 21401.0 |
| hypothetical protein | PHEP_RS05475 | Not Available | Positive | 1279830 - 1283489 | 135111.0 |
| duf6443 domain-containing protein | PHEP_RS05480 | Not Available | Positive | 1283501 - 1287007 | 128622.0 |
| hypothetical protein | PHEP_RS05485 | Not Available | Positive | 1287010 - 1287498 | 18528.9 |
| type iv pilin protein | PHEP_RS05490 | Not Available | Positive | 1287765 - 1288172 | 15266.5 |
| hypothetical protein | PHEP_RS05495 | Not Available | Positive | 1288187 - 1288699 | 19133.6 |
| gspe/pule family protein | PHEP_RS05500 | Not Available | Positive | 1288686 - 1290119 | 53982.2 |
| type ii secretion system protein gspd | PHEP_RS05505 | Not Available | Positive | 1290121 - 1292088 | 71782.2 |
| hypothetical protein | PHEP_RS05510 | Not Available | Positive | 1292090 - 1293202 | 40987.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
