Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | PHEP_RS05365 | Not Available | Negative | 1259301 - 1260473 | 44006.9 |
| fecr family protein | PHEP_RS05370 | Not Available | Positive | 1260605 - 1261759 | 42623.3 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS05375 | Not Available | Positive | 1262007 - 1265579 | 133083.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS05380 | Not Available | Positive | 1265590 - 1266939 | 51196.4 |
| tlpa family protein disulfide reductase | PHEP_RS21510 | Not Available | Positive | 1266956 - 1268218 | 48346.3 |
| hypothetical protein | PHEP_RS05390 | Not Available | Positive | 1268249 - 1268641 | 14629.1 |
| tlpa family protein disulfide reductase | PHEP_RS21515 | Not Available | Positive | 1268649 - 1269800 | 42703.2 |
| protein-disulfide reductase dsbd domain-containing protein | PHEP_RS05400 | Not Available | Positive | 1269797 - 1270243 | 16850.7 |
| hypothetical protein | PHEP_RS22150 | Not Available | Positive | 1270342 - 1270515 | 6488.95 |
| hypothetical protein | PHEP_RS05405 | Not Available | Positive | 1270493 - 1271098 | 23757.0 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
