Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | PHEP_RS05215 | Not Available | Positive | 1225978 - 1226847 | 31476.8 |
| alpha/beta hydrolase | PHEP_RS05220 | Not Available | Positive | 1226859 - 1227683 | 31131.2 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS05225 | Not Available | Positive | 1227793 - 1228710 | 33929.6 |
| response regulator transcription factor | PHEP_RS05230 | Not Available | Negative | 1228734 - 1229537 | 31226.5 |
| hypothetical protein | PHEP_RS05235 | Not Available | Positive | 1229688 - 1231430 | 64940.1 |
| lytr/algr family response regulator transcription factor | PHEP_RS05240 | Not Available | Negative | 1231436 - 1232161 | 28153.1 |
| helix-turn-helix domain-containing protein | PHEP_RS05245 | Not Available | Positive | 1232361 - 1232708 | 13378.6 |
| hypothetical protein | PHEP_RS05255 | Not Available | Positive | 1232981 - 1236235 | 121550.0 |
| duf6443 domain-containing protein | PHEP_RS05260 | Not Available | Positive | 1236247 - 1239708 | 126136.0 |
| hypothetical protein | PHEP_RS05265 | Not Available | Positive | 1239708 - 1240157 | 17262.3 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
