Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | PHEP_RS05165 | Not Available | Positive | 1206046 - 1207005 | 36345.8 |
| maue/doxx family redox-associated membrane protein | PHEP_RS05170 | Not Available | Positive | 1207133 - 1207588 | 17037.7 |
| hypothetical protein | PHEP_RS05175 | Not Available | Positive | 1207676 - 1207984 | 11061.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS05180 | Not Available | Negative | 1208034 - 1209413 | 52795.9 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS05185 | Not Available | Negative | 1209422 - 1212712 | 122994.0 |
| fecr family protein | PHEP_RS05190 | Not Available | Negative | 1212712 - 1213962 | 45761.1 |
| helix-turn-helix domain-containing protein | PHEP_RS05195 | Not Available | Positive | 1214420 - 1215451 | 39316.1 |
| ig-like domain-containing protein | PHEP_RS05200 | Not Available | Positive | 1215613 - 1224396 | 291588.0 |
| porp/sprf family type ix secretion system membrane protein | PHEP_RS05205 | Not Available | Positive | 1224415 - 1225302 | 32321.4 |
| pyrimidine/purine nucleoside phosphorylase | PHEP_RS05210 | Not Available | Positive | 1225422 - 1225724 | 10872.8 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
