Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | PHEP_RS05065 | Not Available | Positive | 1182331 - 1183638 | 48865.8 |
| duf1456 family protein | PHEP_RS05070 | Not Available | Positive | 1183640 - 1183891 | 9555.66 |
| pas domain s-box protein | PHEP_RS05075 | Not Available | Negative | 1183888 - 1184703 | 31544.7 |
| laci family dna-binding transcriptional regulator | PHEP_RS05080 | Not Available | Positive | 1185038 - 1186063 | 38045.4 |
| susc/raga family tonb-linked outer membrane protein | PHEP_RS05085 | Not Available | Positive | 1186264 - 1189245 | 109790.0 |
| ragb/susd family nutrient uptake outer membrane protein | PHEP_RS05090 | Not Available | Positive | 1189267 - 1191039 | 65330.8 |
| family 16 glycoside hydrolase | PHEP_RS05095 | Not Available | Positive | 1191070 - 1193430 | 85314.2 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS05100 | Not Available | Positive | 1193437 - 1194393 | 35250.9 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS05105 | Not Available | Positive | 1194404 - 1195327 | 34278.3 |
| sugar phosphate isomerase/epimerase family protein | PHEP_RS05110 | Not Available | Positive | 1195346 - 1196350 | 36729.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
