Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-translocating pyrophosphatase | PHEP_RS05015 | Not Available | Negative | 1171405 - 1173711 | 79715.3 |
| apc family permease | PHEP_RS05020 | Not Available | Positive | 1174283 - 1175725 | 52433.3 |
| hypothetical protein | PHEP_RS05025 | Not Available | Positive | 1175856 - 1176167 | 11693.2 |
| ompa family protein | PHEP_RS05030 | Not Available | Positive | 1176283 - 1176810 | 18963.9 |
| tigr01212 family radical sam protein | PHEP_RS05035 | Not Available | Positive | 1176913 - 1177869 | 36316.8 |
| ammonium transporter | PHEP_RS05040 | Not Available | Positive | 1178308 - 1179669 | 48297.9 |
| porin | PHEP_RS05045 | Not Available | Positive | 1179716 - 1180750 | 36679.1 |
| duf4468 domain-containing protein | PHEP_RS05050 | Not Available | Positive | 1180826 - 1181395 | 21260.6 |
| ribonuclease h-like ykuk family protein | PHEP_RS05055 | Not Available | Negative | 1181396 - 1181869 | 17719.4 |
| hypothetical protein | PHEP_RS05060 | Not Available | Positive | 1182086 - 1182304 | 8807.89 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
