Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter heparinus |
| Strain | DSM 2366 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Terrestrial |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1491779 bp
Thymine Count
1502777 bp
Guanine Count
1083931 bp
Cytosine Count
1088896 bp
Genome Length
5167383 bp
Protein-coding Genes
4228 genes
Non-Coding Genes
57 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PHEP_RS00455 | Not Available | Positive | 102570 - 103133 | 21260.4 |
| gnat family n-acetyltransferase | PHEP_RS00460 | Not Available | Positive | 103130 - 103624 | 18825.0 |
| m20/m25/m40 family metallo-hydrolase | PHEP_RS00465 | Not Available | Negative | 103632 - 104591 | 35253.0 |
| duf4407 domain-containing protein | PHEP_RS00470 | Not Available | Negative | 104588 - 105673 | 41057.2 |
| rhodanese-like domain-containing protein | PHEP_RS00475 | Not Available | Positive | 105850 - 106167 | 11894.3 |
| duf6358 family protein | PHEP_RS00480 | Not Available | Positive | 106170 - 106358 | 7159.16 |
| dipeptide epimerase | PHEP_RS00485 | Not Available | Negative | 106345 - 107382 | 38424.7 |
| hypothetical protein | PHEP_RS00490 | Not Available | Positive | 107469 - 108437 | 37115.4 |
| rhomboid family intramembrane serine protease | PHEP_RS00495 | Not Available | Negative | 108447 - 109064 | 23293.0 |
| outer membrane beta-barrel protein | PHEP_RS00500 | Not Available | Negative | 109081 - 109788 | 25600.5 |
Pathways
429 pathways
Health Effects
No health effects information available for this bacterium.
