Salmonella enterica subsp. enterica serovar Agona str. SL483

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Agona str. SL483 is a pathogenic, Gram-negative bacterium that exhibits a microaerophilic oxygen requirement and has a spirilla shape. This strain is categorized as a chemoorganotroph, indicating that it derives its energy from organic compounds. The cells are typically arranged in chains or as singles, and they possess flagella, although they are non-motile. S. enterica serovar Agona has two replicons and two membranes, characteristic of its Gram-negative classification. This bacterium thrives optimally at a temperature of 37°C, fitting into the mesophilic temperature range. Notably, it does not form spores, which is a common trait among many pathogenic bacteria. In terms of ecological interactions, S. enterica serovar Agona is free-living but can also be host-associated, indicating its ability to inhabit a range of environments, including within animal hosts. As a pathogenic organism, it has implications for public health, particularly in foodborne illnesses. Understanding the traits of S. enterica serovar Agona contributes to our knowledge of its ecological roles and potential impacts on health and disease transmission. Its microaerophilic nature and association with hosts underline the importance of environmental conditions in its survival and pathogenicity. This highlights the need for continued research into such microorganisms to better understand their behaviors and interactions within different habitats. Accessions for this strain include NC_011148.1 and NC_011149.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
StrainSL483

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Agona str. SL483
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Salmonella enterica subsp. enterica serovar Agona str. SL483


Gene Summary

Adenine Count

1152031 bp

Thymine Count

1147286 bp

Guanine Count

1247214 bp

Cytosine Count

1252129 bp

Genome Length

4798660 bp

Protein-coding Genes

4388 genes

Non-Coding Genes

260 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1215893 - 1215906Not Available
Protease iiSEAG_RS06165Not AvailablePositive1230746 - 123279778950.9
Exodeoxyribonuclease xSEAG_RS06170Not AvailableNegative1232832 - 123353026393.0
carbon-nitrogen hydrolase family proteinSEAG_RS06175Not AvailableNegative1233554 - 123421023859.6
Putative dna polymeraseSEAG_RS06180Not AvailableNegative1234318 - 12345488775.66
copc domain-containing protein yobaSEAG_RS06185Not AvailablePositive1234686 - 123506013321.9
copper homeostasis membrane protein copdSEAG_RS06190Not AvailablePositive1235061 - 123593632508.2
Hypothetical proteinSEAG_RS06195Not AvailablePositive1235953 - 123630612729.6
IntegraseSEAG_RS06205Not AvailableNegative1236689 - 123703612802.4
Prophage virulence determinantSEAG_RS06215Not AvailablePositive1237304 - 123972487536.8

Displaying genes 1 – 10 of 4701 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1820 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da

Displaying 1–10 of 1820 metabolites

Health Effects

No health effects information available for this bacterium.