Salmonella enterica subsp. enterica serovar Agona str. SL483

Gram-negativeSpirillaNon-motileMicroaerophilic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Salmonella

Description

Salmonella enterica subsp. enterica serovar Agona str. SL483 is a pathogenic, Gram-negative bacterium that exhibits a microaerophilic oxygen requirement and has a spirilla shape. This strain is categorized as a chemoorganotroph, indicating that it derives its energy from organic compounds. The cells are typically arranged in chains or as singles, and they possess flagella, although they are non-motile. S. enterica serovar Agona has two replicons and two membranes, characteristic of its Gram-negative classification. This bacterium thrives optimally at a temperature of 37°C, fitting into the mesophilic temperature range. Notably, it does not form spores, which is a common trait among many pathogenic bacteria. In terms of ecological interactions, S. enterica serovar Agona is free-living but can also be host-associated, indicating its ability to inhabit a range of environments, including within animal hosts. As a pathogenic organism, it has implications for public health, particularly in foodborne illnesses. Understanding the traits of S. enterica serovar Agona contributes to our knowledge of its ecological roles and potential impacts on health and disease transmission. Its microaerophilic nature and association with hosts underline the importance of environmental conditions in its survival and pathogenicity. This highlights the need for continued research into such microorganisms to better understand their behaviors and interactions within different habitats. Accessions for this strain include NC_011148.1 and NC_011149.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusSalmonella
SpeciesSalmonella enterica
StrainSL483

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Salmonella enterica subsp. enterica serovar Agona str. SL483
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophilic
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementChains - Singles
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityYes

Genome Summary

Salmonella enterica subsp. enterica serovar Agona str. SL483

Gene Summary

Adenine Count

11311 bp

Thymine Count

11193 bp

Guanine Count

7275 bp

Cytosine Count

8199 bp

Genome Length

37978 bp

Protein-coding Genes

53 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive1215893 - 1215906Not Available
Protease iiSEAG_RS06165Not AvailablePositive1230746 - 123279778950.9
Exodeoxyribonuclease xSEAG_RS06170Not AvailableNegative1232832 - 123353026393.0
carbon-nitrogen hydrolase family proteinSEAG_RS06175Not AvailableNegative1233554 - 123421023859.6
Putative dna polymeraseSEAG_RS06180Not AvailableNegative1234318 - 12345488775.66
copc domain-containing protein yobaSEAG_RS06185Not AvailablePositive1234686 - 123506013321.9
copper homeostasis membrane protein copdSEAG_RS06190Not AvailablePositive1235061 - 123593632508.2
Hypothetical proteinSEAG_RS06195Not AvailablePositive1235953 - 123630612729.6
IntegraseSEAG_RS06205Not AvailableNegative1236689 - 123703612802.4
Prophage virulence determinantSEAG_RS06215Not AvailablePositive1237304 - 123972487536.8

Displaying genes 1 – 10 of 4701 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

2014 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 2014 metabolites

Health Effects

No health effects information available for this bacterium.