Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodopseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodopseudomonas |
| Species | Rhodopseudomonas palustris |
| Strain | TIE-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Soil |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Photolithoautotroph |
| Pathogenicity | No |
Genome Summary
Rhodopseudomonas palustris TIE-1
Accession NumberNC_011004.1
Gene Summary
Adenine Count
1008103 bp
Thymine Count
1010364 bp
Guanine Count
1866123 bp
Cytosine Count
1859451 bp
Genome Length
5744041 bp
Protein-coding Genes
5229 genes
Non-Coding Genes
145 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Transcription regulator | RPAL_RS26420 | Not Available | - | 694225 - 695016 | 29965.1 |
| helix-turn-helix domain-containing protein | RPAL_RS26650 | Not Available | + | 695097 - 695396 | 11058.4 |
| hypothetical protein | RPAL_RS03250 | Not Available | + | 695393 - 695665 | 9501.33 |
| Parb-like nuclease | RPAL_RS03255 | Not Available | + | 695730 - 696545 | 29786.5 |
| Conserved transposable prophage protein | RPAL_RS03260 | Not Available | + | 696550 - 697002 | 16735.9 |
| Attl | Not Available | Not Available | + | 696930 - 696942 | Not Available |
| Integrase | RPAL_RS03265 | Not Available | + | 696984 - 699173 | 80226.3 |
| Mobile element protein | RPAL_RS03270 | Not Available | + | 699248 - 699955 | 25671.0 |
| Hypothetical protein | RPAL_RS26425 | Not Available | + | 699957 - 700598 | 23510.6 |
| Hypothetical protein | RPAL_RS03280 | Not Available | + | 700598 - 700984 | 13581.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.